Rincon, A., Bloch, J.I., Suarez, C., MacFadden, B.J., and Jaramillo, C. New Floridatragulines (Mammalia, Camelidae) From The Early Miocene Las Cascadas Formation, Panama. 2012. Journal of Vertebrate Paleontology, 32: 456-475.
Cadena, E., Ksepka, D.T., Jaramillo, C., Bloch, J.I. 2012 New pelomedusoid turtles (Testudines, Panpleurodira) from the late Palaeocene Cerrejón Formation of Colombia and implications for phylogeny and body size evolution. Journal of Systematic Paleontology, DOI 10.1080/14772019.2011.569031.
Schemm-Gregory, M., Rojas-Briceño, A., Patarroyo, P., and Jaramillo, C. 2012 First report of Hadrosia Cooper, 1983 in South America and its biostratigraphical and paleobiogeographical implications. Cretaceous Research 34: 257-267.
Punyasena, S., Jaramillo, C., de la Parra, F., and Du, Y. 2012 Probabilistic correlation of single stratigraphic samples – a generalized approach for biostratigraphic data. AAPG Bulletin 96: 235-244.
Hasting, A., Bloch, J., and Jaramillo, C. 2011 A new longirostrine dyrosaurid (Crocodylomorpha, Mesoeucrocodylia) from the Paleocene of north-eastern Colombia: biogeographic and behavioral implications for New World Dyrosauridae. Palaeontology 54: 1095-1116.
Antoine, P-O., Marivaux, L., Croft, D.A., Billet, G., Ganerød, M., Jaramillo, C., Martin, T., Orliac, M.J., Tejada, J., Altamirano, A., Duranthon, F., Fanjat, G., Rousse, S. and Salas-Gismondi, R. 2011 Middle Eocene from Peruvian Amazonia reveals pattern and timing of caviomorph rodent origin and biogeography. Proceedings of the Royal Society, B. doi:10.1098/rspb.2011.1732.
Herrera, F., Manchester, S.R., Hoot, S.B., Wefferling, K. Carvalho, M. and Jaramilloc, C. 2011 Phytogeographic Implications of fossil endocarps of Menispermaceae from the Paleocene of Colombia. American Journal of Botany 98: 2004-2017.
Serrano, L., Ferrari, L., Lopez, M., Petrone, C.M., and Jaramillo, C. 2011 An integrative geologic, geochronologic and geochemical study of Gorgona Island, Colombia: implications for the formation of the Caribbean plateau. Earth and Planetary Science Letters 309: 324-336.
Cernusak, L.A., Winter, K., Martínez, C., Correa, E., Aranda, J., Garcia, M., Jaramillo, C. and Turner, B.L. 2011 Growth and water-use efficiency of legume versus non-legume tropical tree seedlings under elevated [CO2]. Plant Physiology 157: 372–385.
Carvalho, M., Herrera, F., Jaramillo, C., Wing, S., and Callejas, R. 2011 Paleocene Malvaceae from northern South America and their biogeographical implications. American Journal of Botany 98: 1337-1355.
Hoorn, C., Wesselingh, F., Steege, H.t., Mora, A., Sevink, J., Sanmartin, I., Sanchez-Meseguer, A., Anderson, C.L., Figueiredo, J., Jaramillo, C., Riff, D., Negri, F.R., Hooghiemstra, H., Lundberg, J.G., Stadler, T., Sarkinen, T., and Antonelli, A., 2011, Origins of Biodiversity, Response: Science 331: 399-400.
Peppen, D., Royer, D., Cariglino, C., Oliver, S., Newman, D., Leight, E., Enikolopov, G., Fernandez-Burgos, M., Herrera, F., Adams, J., Correa, E., Currano, E., Hinojosa, F., Hoganson, J., Iglesias, A., Jaramillo, C., Johnson, K., Kraft, K., Levelock, E., Lusk, C., Niinemets, U., Peñuelas, J., Rapson, G., Wing, S., and Wright, I. 2011 Sensitivity of leaf size and shape to climate: global patterns and paleoclimatic applications. New Phytologist 190: 724-739
Field, T.S., Brodribb, T.J., Iglesias, A., Chatelet, D.S., Baresh, A., Upchurch, G.R., Gomez, B., Mohr, B.A.R., Coiffard, C., Kvaček, J., and Jaramillo, C. 2011 Fossil evidence for Cretaceous escalation in angiosperm leaf vein evolution. PNAS doi/10.1073/pnas.1014456108.
Jaramillo, C., Ochoa. D., Contreras, L., Pagani, M., Carvajal-Ortiz, H., Pratt, L. M., Krishnan, S., Cardona, A., Romero, M., Quiroz, L., Rodriguez, G., Rueda, M. J., de la Parra, F., Moron, S., Green, W., Bayona, G., Montes, C., Quintero, O., Ramirez, R., Mora, G., Schouten, S., Bermudez, H., Navarrete, R., Parra, F., Alvarán, M., Osorno, J., Crowley, J L., Valencia, V., Vervoort, J. Effects of Rapid Global Warming at the Paleocene-Eocene Boundary on Neotropical Vegetation. Science 330, 957-961, DOI : 10.1126/Science.1193833
Uhen, M.D, Coates, A., Jaramillo, C., Montes, C., Pimiento, C., Rincon, A., Strong, N., and Velez-Juarbe, J. 2010 Marine mammals from the Miocene of Panama. Journal of South American Science, doi:10.1016/j.jsames.2010.08.002.
Quiroz, L. and Jaramillo, C. 2010 Stratigraphy and sedimentary environments of Miocene shallow to marginal marine deposits in the Urumaco Trough, Falcon Basin, western Venezuela. In: Sanchez-Villagra, M., Aguilera, O. & Carlini, A.A. (eds.) Urumaco and Venezuelan Palaeontology. The fossil record of the Northern Neotropics. Bloomington, Indiana University Press. pp. 153-172.
Quiroz, L. and Jaramillo, C. 2009 Stratigraphy and sedimentary environments of Miocene shallow to marginal marine deposits in the Urumaco Trough, Falcon Basin, western Venezuela. In: Sanchez-Villagra, M., Aguilera, O. & Carlini, A.A. (eds.) Urumaco and Venezuelan Palaeontology. The fossil record of the Northern Neotropics. Bloomington, Indiana University Press. In press.
Hasting, A., Bloch, J., Cadena, E., and Jaramillo, C. 2010. A new small short-snouted Dyrosaurid (Crocodylomorpha, Mesoeucrocodylia) from the Paleocene of northeastern Colombia. Journal of Vertebrate Paleontology 30: 139-162.
Latrubesse, E.M., Cozzuol, M., Ferreira da Silva, S., Rigsby, C., Absy, M.L., and Jaramillo, C. 2010 The Late Miocene Paleogeography of the Amazon Basin. Earth Science Reviews, doi:10.1016/j.earscirev.2010.02.005
MacFadden, B.J., Kirby, M.X., Rincon, A., Montes, C., Moron, S., Strong, N., and Jaramillo, C. 2010 Extinct Peccary “Cynorca” occidentale (Tayasuidae) from the Miocene of Panama and Correlations to North America. Journal of Vertebrate Paleontology 84: 288-298.
Correa, E., Jaramillo, C., Manchester, S. and Gutierrez, M. 2010 A fruit and leaves of Rhamnaceous affinities from the late Cretaceous (Maastrichtian) of Colombia. American Journal of Botany 97: 71-79.
Cadena, E., Bloch, J., Jaramillo, C. 2010 New Podocnemidid turtle (Testudines; Pleurodira) from the middle–late Paleocene of tropical South America. Journal of Vertebrate Paleontology 30: 367–382
Silva, S., Jaramillo, C., and Absy, M.L. 2010. Neogene Palynology of the Solimoes Basin, Brazilian Amazonia. Palaeontographica 283: 1–67.
Jaramillo, C., Hoorn, C., Silva, S., Leite, F., Herrera, F., Quiroz, L., Dino, R., and Antonioli, L. 2010 The origin of the modern Amazon rainforest: implications from the palynological and paleobotanical record. In: Hoorn, M.C. and Wesselingh, F.P. (Eds.) Amazonia, Landscape and Species Evolution. Blackwell, Oxford: 317-334.
Gomez, A., Jaramillo, C., Parra, M. and Mora, A. 2009. Huesser horizon: a lake and a marine incursion in Northwestern South America during early Miocene. Palaios, 24: 199-210
Carvajal-Ortiz, H., Mora, G., and Jaramillo, C. 2009 A molecular evaluation of bulk organic carbon isotope chemostratigraphy for terrestrial correlations: an example from two Paleocene-Eocene tropical sequences. Palaeogeography, Palaeoclimatology, Palaeoecology, 277, 173-183..
Gomez, N., Jaramillo, C., Herrera, F., Wing, S.L., and Callejas, R. Palms (Arecaceae) from a Paleocene rainforest of northern Colombia. 2009 American Journal of Botany, 96: 1300-1312.
Head, J., Bloch, J. Hasting, A., Bourque, J., Cadena, E., Herrera, F, Polly, P.D., and Jaramillo, C. 2009 Giant Boine Snake From A Paleocene Neotropical Rainforest Indicates Hotter Past Equatorial Temperatures. Nature 457: 715-718.
Gomez, A., Jaramillo, C., Parra, M. and Mora, A. 2009. Huesser horizon: a lake and a marine incursion in Northwestern South America during early Miocene. Palaios, 24: 199-210
Doria, G., Jaramillo, C., and Herrera, F. 2008 Menispermaceae from the Cerrejon formation, middle to late Paleocene. American Journal of Botany 95: 954-973.
Cadena, E., Jaramillo, C., and Paramo, M. 2008 Chelus colombiana from the Early Miocene of Colombia, an emendation. Journal of Vertebrate Paleontology, 28:1206–1212.
Santos, C., Jaramillo, C. Bayona, G. Rueda, M. and Torres, V. 2008 Late Eocene marine incursión in Northwestern South America. Palaeogeography, Palaeoclimatology, Palaeoecology, 264:140–146
Cadena, E., Jaramillo, C., and Paramo, M. 2008 The First Late Pleistocene Record of Kinosternon (Cryptodira: Kinosternidae) Turtles, for Northern South America, Pubenza Locality, Colombia. South American Journal of Herpetology 2: 201-205.
Herrera, F., Jaramillo, C., Dilcher, D., Wing, S.L., Gomez, C. 2008 Fossil Araceae from a Paleocene neotropical rainforest in Colombia. American Journal of Botany, 95: 1569-1583.
Jaramillo, C., Pardo-Trujillo, A,. Rueda, M., Harrington, G., Bayona, G., Torres, V., and Mora, G., 2007, Palynology of the Upper Paleocene Cerrejon Formation, Northern Colombia. 2007. Palynology 31: 153-189.
Hawkins, B.A., Felizola Diniz-Filho, J.A., Jaramillo, C.A. and Soeller, S.A. 2007 Climate, niche conservatism, and the global bird diversity gradient. American Naturalist 170, Supplement, S16-S27.
Harrington, G. and Jaramillo, C. 2007 Paratropical floral extinction in the Late Palaeocene-Early Eocene. Journal of Geology, 164: 323-332.
Cuartas, C., Jaramillo, C., and Martinez, J.I. 2006. Quantitative Biostratigraphy Model for the Tertiary of the Lower Magdalena Basin, Colombian Caribbean. CT&F 3: 7-28.
Jaramillo, C., Rueda, M. and Mora, G. 2006 Cenozoic Plant Diversity in the Neotropics. Science, 311: 1893-1896.
Jaramillo, C. 2002. Response of tropical vegetation to Paleogene warming. Paleobiology, 28:222-243.